Software
rhizoTrak
... a Fiji plugin for handy manual annotation of roots in minirhizotron time-series images.
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Jstacs
... a Java framework for statistical analysis and classification of biological sequences
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Alida
... java library for developing algorithms in data analysis supporting automatic generation of commandline tools and graphical user interfaces, as well as automatic process logging.
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MiToBo
... java library for the automatic analysis of microscopy images; MiToBo is an extension for the Java toolkit ImageJ and builds on top of Alida, i.e. provides the full functionality of the Alida library
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ImageJ-Plugins
... extensions for the Java image processing framework ImageJ
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Supervised Penalized Canonical Correlation Analysis
... an R-package for the analysis of correlations between two paired data set exploiting the experimental design
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